Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PRSS44-201ENST00000515154 1146 ntBASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AC022211.2-201ENST00000585075 2527 ntBASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AL138781.1-201ENST00000566567 1274 ntBASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 AL096828.2-201ENST00000567259 1965 ntBASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SND1-IT1Q9HBX3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.09□□□□□ -0.47
SND1-IT1Q9HBX3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms