Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC00167-201ENST00000530583 1419 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AC073508.3-201ENST00000619697 1419 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AC024563.2-201ENST00000603282 481 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AL136038.4-201ENST00000603606 1261 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AC139887.4-201ENST00000607877 719 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 AC011558.1-201ENST00000623459 338 ntBASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 AC022898.2-201ENST00000616822 1312 ntBASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 STARP1-201ENST00000397973 869 ntBASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 YBX1P2-201ENST00000489612 999 ntBASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 AL391807.1-203ENST00000604392 2365 ntBASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC40Q9H9A6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 AC005521.1-201ENST00000393351 872 ntBASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 SPDYE15P-201ENST00000424157 909 ntBASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.3■□□□□ 0.52
LRRC40Q9H9A6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms