Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 LAGE3P1-201ENST00000425356 484 ntBASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 BCRP1-201ENST00000444246 691 ntBASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 AC068472.1-201ENST00000474589 881 ntBASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBE2OQ9C0C9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 KRT8P32-201ENST00000512863 1461 ntBASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 AC116562.4-201ENST00000641316 2276 ntBASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 KRT18P2-201ENST00000447938 1258 ntBASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 AL138831.2-201ENST00000606564 490 ntBASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 C20orf181-201ENST00000623918 480 ntBASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2OQ9C0C9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 AC005593.1-201ENST00000624894 515 ntBASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 AC002310.6-201ENST00000624451 1377 ntBASIC19.8■□□□□ 0.76
UBE2OQ9C0C9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2OQ9C0C9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms