Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 LIN28AP1-201ENST00000429574 405 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 KRT18P35-201ENST00000510488 1269 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM2Q9C040 PCDHB18P-201ENST00000524813 2368 ntBASIC16.62■□□□□ 0.25
TRIM2Q9C040 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM2Q9C040 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 AC005332.8-201ENST00000622750 2735 ntBASIC16.61■□□□□ 0.25
TRIM2Q9C040 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ATP5G1P1-201ENST00000448724 379 ntBASIC16.61■□□□□ 0.25
TRIM2Q9C040 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 AC134043.2-201ENST00000624206 2238 ntBASIC16.61■□□□□ 0.25
TRIM2Q9C040 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM2Q9C040 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM2Q9C040 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.61■□□□□ 0.25
TRIM2Q9C040 AC067852.2-201ENST00000590513 2313 ntBASIC16.61■□□□□ 0.25
TRIM2Q9C040 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM2Q9C040 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM2Q9C040 KRT18P55-202ENST00000578578 1546 ntBASIC16.6■□□□□ 0.25
TRIM2Q9C040 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms