Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 ELK2BP-201ENST00000415014 1224 ntBASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 AC027796.2-201ENST00000575326 344 ntBASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDH11XQ9BZA7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.31
PCDH11XQ9BZA7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 AC004706.3-202ENST00000621574 984 ntBASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 AL353593.2-201ENST00000602529 1483 ntBASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH11XQ9BZA7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 COX5BP2-201ENST00000392354 334 ntBASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 AL020989.1-201ENST00000422979 469 ntBASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 MCCD1P2-201ENST00000423228 335 ntBASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH11XQ9BZA7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 AC211486.1-202ENST00000416371 468 ntBASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 KRT18P2-201ENST00000447938 1258 ntBASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 AC211476.1-201ENST00000503899 468 ntBASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 AC002310.6-201ENST00000624451 1377 ntBASIC23.24■■□□□ 1.31
PCDH11XQ9BZA7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 AC126763.1-201ENST00000552015 2118 ntBASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 PHGDH-209ENST00000641074 1780 ntBASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH11XQ9BZA7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms