Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 KRT8P45-201ENST00000414328 1447 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 MTMR9LP-203ENST00000426597 1545 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC008556.1-201ENST00000610908 2040 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 HLA-DQB1-201ENST00000374943 1656 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RER1-204ENST00000378518 522 ntTSL 3 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC073210.2-201ENST00000430369 194 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 UQCRFS1P1-201ENST00000435169 820 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC142381.2-201ENST00000566120 298 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AL031432.3-201ENST00000607698 485 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC068587.9-201ENST00000641814 219 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms