Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 AL645608.8-201ENST00000606034 2086 ntBASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 AC096733.2-201ENST00000609937 1394 ntBASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 CRYGFP-201ENST00000418459 633 ntBASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 MFAP1P1-201ENST00000442257 1255 ntBASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 MIR3180-5-201ENST00000583743 153 ntBASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.26■□□□□ 0.35
THUMPD3Q9BV44 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 AC006116.8-202ENST00000587620 1550 ntBASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 MIR149-201ENST00000384879 89 ntBASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THUMPD3Q9BV44 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 KRT17P2-201ENST00000300992 1314 ntBASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 UNC93B2-201ENST00000285383 730 ntBASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THUMPD3Q9BV44 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms