Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE1Q99829 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE1Q99829 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE1Q99829 AP006294.2-201ENST00000641667 209 ntBASIC18.04■□□□□ 0.48
CPNE1Q99829 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 PP12613-201ENST00000424958 2230 ntBASIC18.04■□□□□ 0.48
CPNE1Q99829 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE1Q99829 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE1Q99829 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE1Q99829 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE1Q99829 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE1Q99829 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE1Q99829 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 AL355312.1-201ENST00000407115 2176 ntBASIC18.03■□□□□ 0.48
CPNE1Q99829 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.03■□□□□ 0.48
CPNE1Q99829 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE1Q99829 AC100803.2-201ENST00000562459 1963 ntBASIC18.03■□□□□ 0.48
CPNE1Q99829 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 NEK4P2-201ENST00000580004 1012 ntBASIC18.03■□□□□ 0.48
CPNE1Q99829 MIR3917-201ENST00000580971 93 ntBASIC18.03■□□□□ 0.48
CPNE1Q99829 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 AC092865.7-201ENST00000641832 219 ntBASIC18.03■□□□□ 0.48
CPNE1Q99829 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPNE1Q99829 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CPNE1Q99829 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE1Q99829 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE1Q99829 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE1Q99829 CYP2D8P-201ENST00000433633 1490 ntBASIC18.02■□□□□ 0.48
CPNE1Q99829 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE1Q99829 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CPNE1Q99829 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CPNE1Q99829 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE1Q99829 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CPNE1Q99829 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE1Q99829 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE1Q99829 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE1Q99829 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE1Q99829 NAPSB-206ENST00000562112 1266 ntBASIC18.02■□□□□ 0.48
CPNE1Q99829 AC108860.2-201ENST00000562760 2183 ntBASIC18.02■□□□□ 0.48
CPNE1Q99829 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CPNE1Q99829 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE1Q99829 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE1Q99829 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE1Q99829 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 AC141586.5-201ENST00000624546 2050 ntBASIC18.02■□□□□ 0.47
CPNE1Q99829 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CPNE1Q99829 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE1Q99829 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 PRORSD1P-202ENST00000563365 2154 ntBASIC18.01■□□□□ 0.47
CPNE1Q99829 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE1Q99829 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CPNE1Q99829 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE1Q99829 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE1Q99829 LINC00167-201ENST00000530583 1419 ntBASIC18.01■□□□□ 0.47
CPNE1Q99829 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE1Q99829 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE1Q99829 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms