Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
S1PR3Q99500 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.91□□□□□ -0.02
S1PR3Q99500 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
S1PR3Q99500 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.91□□□□□ -0.02
S1PR3Q99500 SLC25A3P1-201ENST00000443844 931 ntBASIC14.91□□□□□ -0.02
S1PR3Q99500 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.91□□□□□ -0.02
S1PR3Q99500 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.91□□□□□ -0.02
S1PR3Q99500 NEK4P2-201ENST00000580004 1012 ntBASIC14.91□□□□□ -0.02
S1PR3Q99500 AC008687.5-201ENST00000593746 558 ntBASIC14.91□□□□□ -0.02
S1PR3Q99500 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.91□□□□□ -0.02
S1PR3Q99500 AC010240.3-201ENST00000607688 395 ntBASIC14.91□□□□□ -0.02
S1PR3Q99500 AC005363.2-201ENST00000618631 242 ntBASIC14.91□□□□□ -0.02
S1PR3Q99500 AC092865.7-201ENST00000641832 219 ntBASIC14.91□□□□□ -0.02
S1PR3Q99500 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
S1PR3Q99500 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.91□□□□□ -0.02
S1PR3Q99500 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.91□□□□□ -0.02
S1PR3Q99500 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.91□□□□□ -0.02
S1PR3Q99500 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
S1PR3Q99500 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
S1PR3Q99500 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
S1PR3Q99500 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.91□□□□□ -0.02
S1PR3Q99500 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.91□□□□□ -0.02
S1PR3Q99500 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
S1PR3Q99500 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
S1PR3Q99500 PHGDH-209ENST00000641074 1780 ntBASIC14.9□□□□□ -0.02
S1PR3Q99500 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
S1PR3Q99500 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
S1PR3Q99500 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 ECEL1P3-201ENST00000427961 737 ntBASIC14.9□□□□□ -0.02
S1PR3Q99500 LIN28AP1-201ENST00000429574 405 ntBASIC14.9□□□□□ -0.02
S1PR3Q99500 AC009947.2-201ENST00000444014 672 ntBASIC14.9□□□□□ -0.02
S1PR3Q99500 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.9□□□□□ -0.02
S1PR3Q99500 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.9□□□□□ -0.02
S1PR3Q99500 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.9□□□□□ -0.02
S1PR3Q99500 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.9□□□□□ -0.02
S1PR3Q99500 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.9□□□□□ -0.02
S1PR3Q99500 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.9□□□□□ -0.02
S1PR3Q99500 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.9□□□□□ -0.02
S1PR3Q99500 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.9□□□□□ -0.02
S1PR3Q99500 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.9□□□□□ -0.02
S1PR3Q99500 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 AC134043.2-201ENST00000624206 2238 ntBASIC14.9□□□□□ -0.02
S1PR3Q99500 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
S1PR3Q99500 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.9□□□□□ -0.02
S1PR3Q99500 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 AC099343.3-201ENST00000605834 2503 ntBASIC14.9□□□□□ -0.02
S1PR3Q99500 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
S1PR3Q99500 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.9□□□□□ -0.02
S1PR3Q99500 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.9□□□□□ -0.02
S1PR3Q99500 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.89□□□□□ -0.03
S1PR3Q99500 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
S1PR3Q99500 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.89□□□□□ -0.03
S1PR3Q99500 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
S1PR3Q99500 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.89□□□□□ -0.03
S1PR3Q99500 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.89□□□□□ -0.03
S1PR3Q99500 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.89□□□□□ -0.03
S1PR3Q99500 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.89□□□□□ -0.03
S1PR3Q99500 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
S1PR3Q99500 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
S1PR3Q99500 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
S1PR3Q99500 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
S1PR3Q99500 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms