Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 TPM4P1-201ENST00000436100 807 ntBASIC14.03□□□□□ -0.16
DUX3Q96PT4 AC091607.1-201ENST00000490318 1060 ntBASIC14.03□□□□□ -0.16
DUX3Q96PT4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DUX3Q96PT4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
DUX3Q96PT4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
DUX3Q96PT4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
DUX3Q96PT4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
DUX3Q96PT4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 TNXA-203ENST00000507684 2038 ntBASIC14.02□□□□□ -0.16
DUX3Q96PT4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
DUX3Q96PT4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.02□□□□□ -0.16
DUX3Q96PT4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
DUX3Q96PT4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DUX3Q96PT4 AC233702.3-201ENST00000578656 1387 ntBASIC14.02□□□□□ -0.17
DUX3Q96PT4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 AC026396.1-201ENST00000419388 421 ntBASIC14.02□□□□□ -0.17
DUX3Q96PT4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 RN7SL510P-201ENST00000581311 263 ntBASIC14.02□□□□□ -0.17
DUX3Q96PT4 AC099336.1-202ENST00000602961 463 ntBASIC14.02□□□□□ -0.17
DUX3Q96PT4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.02□□□□□ -0.17
DUX3Q96PT4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DUX3Q96PT4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.02□□□□□ -0.17
DUX3Q96PT4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms