Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.66□□□□□ -0.06
ZNF48Q96MX3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF48Q96MX3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.65□□□□□ -0.06
ZNF48Q96MX3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 POM121L3P-201ENST00000419331 1163 ntBASIC14.65□□□□□ -0.06
ZNF48Q96MX3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 AC096582.2-201ENST00000510860 516 ntBASIC14.65□□□□□ -0.06
ZNF48Q96MX3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF48Q96MX3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
ZNF48Q96MX3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
ZNF48Q96MX3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF48Q96MX3 AC113404.2-201ENST00000507884 177 ntBASIC14.64□□□□□ -0.07
ZNF48Q96MX3 MIR5100-201ENST00000579544 119 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms