Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.08■□□□□ 0.64
CALR3Q96L12 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.08■□□□□ 0.64
CALR3Q96L12 AC128688.1-201ENST00000487626 519 ntBASIC19.08■□□□□ 0.64
CALR3Q96L12 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.08■□□□□ 0.64
CALR3Q96L12 EGLN1P1-201ENST00000531623 762 ntBASIC19.08■□□□□ 0.64
CALR3Q96L12 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CALR3Q96L12 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CALR3Q96L12 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.08■□□□□ 0.64
CALR3Q96L12 AC116407.2-201ENST00000613639 860 ntBASIC19.08■□□□□ 0.64
CALR3Q96L12 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.08■□□□□ 0.64
CALR3Q96L12 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.08■□□□□ 0.64
CALR3Q96L12 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CALR3Q96L12 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.08■□□□□ 0.64
CALR3Q96L12 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CALR3Q96L12 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.08■□□□□ 0.64
CALR3Q96L12 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CALR3Q96L12 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CALR3Q96L12 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.07■□□□□ 0.64
CALR3Q96L12 AC141586.5-201ENST00000624546 2050 ntBASIC19.07■□□□□ 0.64
CALR3Q96L12 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CALR3Q96L12 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CALR3Q96L12 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CALR3Q96L12 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.07■□□□□ 0.64
CALR3Q96L12 NEK4P2-201ENST00000580004 1012 ntBASIC19.07■□□□□ 0.64
CALR3Q96L12 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 Z99916.2-201ENST00000604037 246 ntBASIC19.07■□□□□ 0.64
CALR3Q96L12 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.07■□□□□ 0.64
CALR3Q96L12 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.07■□□□□ 0.64
CALR3Q96L12 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.07■□□□□ 0.64
CALR3Q96L12 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CALR3Q96L12 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CALR3Q96L12 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CALR3Q96L12 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.06■□□□□ 0.64
CALR3Q96L12 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.06■□□□□ 0.64
CALR3Q96L12 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.06■□□□□ 0.64
CALR3Q96L12 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.06■□□□□ 0.64
CALR3Q96L12 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.06■□□□□ 0.64
CALR3Q96L12 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.06■□□□□ 0.64
CALR3Q96L12 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CALR3Q96L12 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 AL023806.1-201ENST00000603994 1649 ntBASIC19.06■□□□□ 0.64
CALR3Q96L12 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CALR3Q96L12 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.06■□□□□ 0.64
CALR3Q96L12 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.06■□□□□ 0.64
CALR3Q96L12 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CALR3Q96L12 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.05■□□□□ 0.64
CALR3Q96L12 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.05■□□□□ 0.64
CALR3Q96L12 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.05■□□□□ 0.64
CALR3Q96L12 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 AL391005.1-201ENST00000623953 2435 ntBASIC19.05■□□□□ 0.64
CALR3Q96L12 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.05■□□□□ 0.64
CALR3Q96L12 AC132938.6-201ENST00000623828 1655 ntBASIC19.05■□□□□ 0.64
CALR3Q96L12 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CALR3Q96L12 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms