Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.24■□□□□ 0.03
SPG11Q96JI7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 AJ011932.1-201ENST00000621707 465 ntBASIC15.24■□□□□ 0.03
SPG11Q96JI7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 AC011467.4-201ENST00000594891 528 ntBASIC15.23■□□□□ 0.03
SPG11Q96JI7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SPG11Q96JI7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.23■□□□□ 0.03
SPG11Q96JI7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 AL139400.1-201ENST00000366220 510 ntBASIC15.22■□□□□ 0.03
SPG11Q96JI7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 PRSS29P-201ENST00000440800 595 ntBASIC15.22■□□□□ 0.03
SPG11Q96JI7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 PRYP5-201ENST00000451909 266 ntBASIC15.22■□□□□ 0.03
SPG11Q96JI7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 AP002472.1-201ENST00000577490 586 ntBASIC15.22■□□□□ 0.03
SPG11Q96JI7 AC073592.4-201ENST00000623827 446 ntBASIC15.22■□□□□ 0.03
SPG11Q96JI7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 MKNK2P1-201ENST00000437526 628 ntBASIC15.22■□□□□ 0.03
SPG11Q96JI7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPG11Q96JI7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.22■□□□□ 0.03
SPG11Q96JI7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms