Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.12■□□□□ 0.49
SHDQ96IW2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SHDQ96IW2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SHDQ96IW2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.12■□□□□ 0.49
SHDQ96IW2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.12■□□□□ 0.49
SHDQ96IW2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SHDQ96IW2 PRSS29P-201ENST00000440800 595 ntBASIC18.12■□□□□ 0.49
SHDQ96IW2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SHDQ96IW2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.12■□□□□ 0.49
SHDQ96IW2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.12■□□□□ 0.49
SHDQ96IW2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.12■□□□□ 0.49
SHDQ96IW2 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.12■□□□□ 0.49
SHDQ96IW2 AL513190.1-201ENST00000621254 727 ntBASIC18.12■□□□□ 0.49
SHDQ96IW2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.12■□□□□ 0.49
SHDQ96IW2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.12■□□□□ 0.49
SHDQ96IW2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SHDQ96IW2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.12■□□□□ 0.49
SHDQ96IW2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHDQ96IW2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHDQ96IW2 ELL2P1-201ENST00000413990 1906 ntBASIC18.11■□□□□ 0.49
SHDQ96IW2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.11■□□□□ 0.49
SHDQ96IW2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 MIR770-201ENST00000390219 98 ntBASIC18.11■□□□□ 0.49
SHDQ96IW2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.11■□□□□ 0.49
SHDQ96IW2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.11■□□□□ 0.49
SHDQ96IW2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.11■□□□□ 0.49
SHDQ96IW2 CEND1P1-201ENST00000451006 455 ntBASIC18.11■□□□□ 0.49
SHDQ96IW2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.11■□□□□ 0.49
SHDQ96IW2 AC004706.3-202ENST00000621574 984 ntBASIC18.11■□□□□ 0.49
SHDQ96IW2 AC092865.6-201ENST00000642101 219 ntBASIC18.11■□□□□ 0.49
SHDQ96IW2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.11■□□□□ 0.49
SHDQ96IW2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SHDQ96IW2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.11■□□□□ 0.49
SHDQ96IW2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.11■□□□□ 0.49
SHDQ96IW2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
SHDQ96IW2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHDQ96IW2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SHDQ96IW2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 AC004817.3-201ENST00000602957 2129 ntBASIC18.1■□□□□ 0.49
SHDQ96IW2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 AL020989.1-201ENST00000422979 469 ntBASIC18.1■□□□□ 0.49
SHDQ96IW2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.1■□□□□ 0.49
SHDQ96IW2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.1■□□□□ 0.49
SHDQ96IW2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.1■□□□□ 0.49
SHDQ96IW2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHDQ96IW2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SHDQ96IW2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.09■□□□□ 0.49
SHDQ96IW2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
SHDQ96IW2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHDQ96IW2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms