Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 IGHGP-201ENST00000390555 1178 ntBASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AC116407.2-201ENST00000613639 860 ntBASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AC004263.2-201ENST00000617183 678 ntBASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 AC104076.2-201ENST00000448912 469 ntBASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM5Q96HC4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 AP003733.1-201ENST00000491725 852 ntBASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 AC063952.2-201ENST00000498792 1227 ntBASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM5Q96HC4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM5Q96HC4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms