Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 MCCD1P1-208ENST00000445732 328 ntBASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 AC097488.1-201ENST00000507834 756 ntBASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 AC093010.1-201ENST00000473625 1624 ntBASIC17.03■□□□□ 0.32
SLC47A1Q96FL8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 AL023284.2-201ENST00000405850 579 ntBASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 SDHAP2-201ENST00000455183 2001 ntBASIC17.02■□□□□ 0.32
SLC47A1Q96FL8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC47A1Q96FL8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 AC009102.3-201ENST00000623118 1491 ntBASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 CA15P1-201ENST00000481698 905 ntBASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC47A1Q96FL8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms