Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 AC004877.2-201ENST00000623941 599 ntBASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 AL049812.1-201ENST00000432563 2267 ntBASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 AL161938.1-201ENST00000569833 2180 ntBASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 AC132938.6-201ENST00000623828 1655 ntBASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 AL020989.1-201ENST00000422979 469 ntBASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 AP000344.2-201ENST00000512987 629 ntBASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM43Q96BQ3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
TRIM43Q96BQ3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 AC004449.1-201ENST00000564240 433 ntBASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 AC138761.1-201ENST00000584393 385 ntBASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM43Q96BQ3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 AC092474.2-201ENST00000424288 719 ntBASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 KRT19P2-202ENST00000557173 1012 ntBASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms