Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.87■□□□□ 0.61
USP13Q92995 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP13Q92995 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USP13Q92995 POM121L3P-201ENST00000419331 1163 ntBASIC18.86■□□□□ 0.61
USP13Q92995 TSPY12P-201ENST00000421279 868 ntBASIC18.86■□□□□ 0.61
USP13Q92995 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.86■□□□□ 0.61
USP13Q92995 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.86■□□□□ 0.61
USP13Q92995 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.86■□□□□ 0.61
USP13Q92995 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
USP13Q92995 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP13Q92995 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
USP13Q92995 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.85■□□□□ 0.61
USP13Q92995 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.85■□□□□ 0.61
USP13Q92995 MRPL3P1-201ENST00000400109 1033 ntBASIC18.85■□□□□ 0.61
USP13Q92995 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.85■□□□□ 0.61
USP13Q92995 SAPCD2P3-201ENST00000455031 850 ntBASIC18.85■□□□□ 0.61
USP13Q92995 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.85■□□□□ 0.61
USP13Q92995 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.85■□□□□ 0.61
USP13Q92995 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.85■□□□□ 0.61
USP13Q92995 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
USP13Q92995 AF238378.1-201ENST00000526806 358 ntBASIC18.85■□□□□ 0.61
USP13Q92995 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP13Q92995 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
USP13Q92995 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.85■□□□□ 0.61
USP13Q92995 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP13Q92995 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.85■□□□□ 0.61
USP13Q92995 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
USP13Q92995 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
USP13Q92995 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP13Q92995 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.85■□□□□ 0.61
USP13Q92995 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP13Q92995 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.84■□□□□ 0.61
USP13Q92995 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP13Q92995 CROCCP3-202ENST00000420820 1947 ntBASIC18.84■□□□□ 0.61
USP13Q92995 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.84■□□□□ 0.61
USP13Q92995 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.84■□□□□ 0.61
USP13Q92995 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.84■□□□□ 0.61
USP13Q92995 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.84■□□□□ 0.61
USP13Q92995 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USP13Q92995 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
USP13Q92995 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.84■□□□□ 0.61
USP13Q92995 AC068472.1-201ENST00000474589 881 ntBASIC18.84■□□□□ 0.61
USP13Q92995 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.84■□□□□ 0.61
USP13Q92995 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
USP13Q92995 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP13Q92995 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
USP13Q92995 AC018470.1-201ENST00000624790 3129 ntBASIC18.83■□□□□ 0.61
USP13Q92995 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP13Q92995 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP13Q92995 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP13Q92995 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP13Q92995 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP13Q92995 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP13Q92995 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP13Q92995 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms