Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 Z99916.2-201ENST00000604037 246 ntBASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.79■□□□□ 0.12
RPS4Y2Q8TD47 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 AP003041.3-201ENST00000527151 707 ntBASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 AL353719.1-201ENST00000566847 864 ntBASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 AL049637.2-201ENST00000641778 930 ntBASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.78■□□□□ 0.12
RPS4Y2Q8TD47 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 LINC00167-201ENST00000530583 1419 ntBASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 AC084018.2-201ENST00000613093 2607 ntBASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 NKILA-202ENST00000614771 2598 ntBASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 REXO1L10P-201ENST00000615707 1290 ntBASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 REXO1L12P-201ENST00000622156 912 ntBASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 AC112497.1-201ENST00000624824 639 ntBASIC15.77■□□□□ 0.12
RPS4Y2Q8TD47 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPS4Y2Q8TD47 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPS4Y2Q8TD47 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms