Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 MIR3687-2-201ENST00000577708 61 ntBASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 MIR3687-1-201ENST00000614492 61 ntBASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF248Q8NDW4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 HNRNPDP1-201ENST00000439535 754 ntBASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 AP001160.2-201ENST00000596071 487 ntBASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 LINC02084-201ENST00000606069 1096 ntBASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF248Q8NDW4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 RCN1P2-201ENST00000398357 915 ntBASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 DNAJB3-201ENST00000446806 729 ntBASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 AC010327.4-202ENST00000591484 748 ntBASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 AL356488.2-201ENST00000602755 427 ntBASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZNF248Q8NDW4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF248Q8NDW4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF248Q8NDW4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ZNF248Q8NDW4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.21■□□□□ 0.34
ZNF248Q8NDW4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
ZNF248Q8NDW4 AL161938.1-201ENST00000569833 2180 ntBASIC17.21■□□□□ 0.34
ZNF248Q8NDW4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZNF248Q8NDW4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms