Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01555Q8NAE3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 IGHV3-47-201ENST00000425060 335 ntBASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 KRT17P6-201ENST00000453795 1220 ntBASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 KRT18P56-201ENST00000507275 550 ntBASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 Z69720.1-201ENST00000601483 472 ntBASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 AC020763.4-201ENST00000623414 4170 ntBASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINC01555Q8NAE3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 AC012615.1-201ENST00000565797 1299 ntBASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC01555Q8NAE3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01555Q8NAE3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms