Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 AL513477.1-201ENST00000602865 2407 ntBASIC22.08■■□□□ 1.12
FAM43AQ8N2R8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
FAM43AQ8N2R8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
FAM43AQ8N2R8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
FAM43AQ8N2R8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FAM43AQ8N2R8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 AL732292.2-201ENST00000609649 430 ntBASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 AC023511.2-201ENST00000618803 211 ntBASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 AL031008.1-201ENST00000619963 541 ntBASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
FAM43AQ8N2R8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 AC104692.2-201ENST00000603054 253 ntBASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 GPALPP1-207ENST00000611650 899 ntBASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 MST1L-201ENST00000442552 2185 ntBASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FAM43AQ8N2R8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 AL162741.1-201ENST00000565563 1558 ntBASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 AC006538.3-201ENST00000612495 578 ntBASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 AC004263.2-201ENST00000617183 678 ntBASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
FAM43AQ8N2R8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms