Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 HLA-A-201ENST00000376802 1334 ntBASIC19.55■□□□□ 0.72
VPS52Q8N1B4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 AF238378.1-201ENST00000526806 358 ntBASIC19.55■□□□□ 0.72
VPS52Q8N1B4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.55■□□□□ 0.72
VPS52Q8N1B4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS52Q8N1B4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 AP000593.1-201ENST00000393668 712 ntBASIC19.54■□□□□ 0.72
VPS52Q8N1B4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 KRT18P41-201ENST00000518924 1277 ntBASIC19.54■□□□□ 0.72
VPS52Q8N1B4 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS52Q8N1B4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 POM121L3P-201ENST00000419331 1163 ntBASIC19.53■□□□□ 0.72
VPS52Q8N1B4 TSPY12P-201ENST00000421279 868 ntBASIC19.53■□□□□ 0.72
VPS52Q8N1B4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
VPS52Q8N1B4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 AC007613.1-201ENST00000572811 2597 ntBASIC19.52■□□□□ 0.72
VPS52Q8N1B4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS52Q8N1B4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms