Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 RBM17P1-201ENST00000453646 1190 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC008550.1-201ENST00000511500 884 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AP003041.3-201ENST00000527151 707 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 BX088651.1-201ENST00000540551 451 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 C2orf69P3-201ENST00000565542 1120 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AL353719.1-201ENST00000566847 864 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 MIR4674-201ENST00000582457 87 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC116562.4-202ENST00000641738 218 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 FLJ13224-201ENST00000313737 1514 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AL096828.2-201ENST00000567259 1965 ntBASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 SLC25A6P5-201ENST00000435663 894 ntBASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AC008764.6-201ENST00000595909 2069 ntBASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
MRPL55Q7Z7F7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 KRT17P2-201ENST00000300992 1314 ntBASIC11.61□□□□□ -0.55
MRPL55Q7Z7F7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms