Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 MIR1233-2-201ENST00000408138 82 ntBASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 MIR1233-1-201ENST00000408722 82 ntBASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 BX842568.4-201ENST00000421222 227 ntBASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 AC093909.1-201ENST00000504731 1122 ntBASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 AC116407.3-201ENST00000623905 1129 ntBASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 PMS2P7-201ENST00000506558 1336 ntBASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI1Q7Z5J4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 AC090164.3-201ENST00000610780 2143 ntBASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 FAM215A-202ENST00000632077 792 ntBASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 KRT8P47-201ENST00000604727 1398 ntBASIC15.31■□□□□ 0.04
RAI1Q7Z5J4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 NEFHP1-201ENST00000412845 2629 ntBASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAI1Q7Z5J4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms