Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTCHD4Q6ZW05 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 MFAP1P1-201ENST00000442257 1255 ntBASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 GCSHP5-201ENST00000443090 522 ntBASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 AL158047.1-201ENST00000445918 881 ntBASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PTCHD4Q6ZW05 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 AL023806.1-201ENST00000603994 1649 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 FER1L4-210ENST00000615531 5998 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 GPAT2P1-201ENST00000444924 1672 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 RPS2P55-201ENST00000397318 883 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 AL023284.2-201ENST00000405850 579 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 AC107956.1-201ENST00000494359 873 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 SLC25A1P4-201ENST00000567977 778 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 DGCR10-201ENST00000609839 495 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 AC113410.3-201ENST00000623366 203 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 AC124067.4-201ENST00000519691 2379 ntBASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTCHD4Q6ZW05 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms