Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 RBM17P3-201ENST00000417687 1192 ntBASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 FAM197Y8-203ENST00000450145 560 ntBASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 DUTP2-201ENST00000519164 463 ntBASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 AC008608.2-201ENST00000606089 416 ntBASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 AL355877.3-201ENST00000622820 899 ntBASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.21■□□□□ 0.67
DCLRE1AQ6PJP8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 TP73-AS1-207ENST00000624167 988 ntBASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 HLA-A-201ENST00000376802 1334 ntBASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DCLRE1AQ6PJP8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 MTDHP3-201ENST00000594186 672 ntBASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 AC120114.3-201ENST00000611923 658 ntBASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 AC022898.2-201ENST00000616822 1312 ntBASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DCLRE1AQ6PJP8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 ABCD1P5-201ENST00000445663 754 ntBASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.18■□□□□ 0.66
DCLRE1AQ6PJP8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms