Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 REXO1L6P-202ENST00000619970 1078 ntBASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 AF238378.1-201ENST00000526806 358 ntBASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 AC011467.2-201ENST00000598425 242 ntBASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.02■□□□□ 0.8
SWSAP1Q6NVH7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SWSAP1Q6NVH7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SWSAP1Q6NVH7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.02■□□□□ 0.79
SWSAP1Q6NVH7 INTS4P1-201ENST00000438455 1935 ntBASIC20.02■□□□□ 0.79
SWSAP1Q6NVH7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SWSAP1Q6NVH7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 SAPCD2P3-201ENST00000455031 850 ntBASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.01■□□□□ 0.79
SWSAP1Q6NVH7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20■□□□□ 0.79
SWSAP1Q6NVH7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms