Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.03■□□□□ 0.96
CERKLQ49MI3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CERKLQ49MI3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 WIZP1-201ENST00000531444 2299 ntBASIC21.02■□□□□ 0.96
CERKLQ49MI3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 AC096633.1-201ENST00000422446 749 ntBASIC21.02■□□□□ 0.96
CERKLQ49MI3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 DUTP2-201ENST00000519164 463 ntBASIC21.02■□□□□ 0.96
CERKLQ49MI3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 FAM215A-202ENST00000632077 792 ntBASIC21.02■□□□□ 0.96
CERKLQ49MI3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 AF228730.7-201ENST00000641842 219 ntBASIC21.02■□□□□ 0.96
CERKLQ49MI3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CERKLQ49MI3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CERKLQ49MI3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CERKLQ49MI3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CERKLQ49MI3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CERKLQ49MI3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 AC243591.1-201ENST00000452967 1364 ntBASIC21.01■□□□□ 0.95
CERKLQ49MI3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 AC021087.4-201ENST00000563761 564 ntBASIC21.01■□□□□ 0.95
CERKLQ49MI3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 AL356309.3-201ENST00000624132 1934 ntBASIC21.01■□□□□ 0.95
CERKLQ49MI3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 AC022898.2-201ENST00000616822 1312 ntBASIC21.01■□□□□ 0.95
CERKLQ49MI3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CERKLQ49MI3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CERKLQ49MI3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21■□□□□ 0.95
CERKLQ49MI3 KRT8P47-201ENST00000604727 1398 ntBASIC21■□□□□ 0.95
CERKLQ49MI3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CERKLQ49MI3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21■□□□□ 0.95
CERKLQ49MI3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21■□□□□ 0.95
CERKLQ49MI3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CERKLQ49MI3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21■□□□□ 0.95
CERKLQ49MI3 MIR7706-201ENST00000613747 67 ntBASIC21■□□□□ 0.95
CERKLQ49MI3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21■□□□□ 0.95
CERKLQ49MI3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21■□□□□ 0.95
CERKLQ49MI3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms