Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.8■□□□□ 0.28
RFX4Q33E94 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.8■□□□□ 0.28
RFX4Q33E94 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 AF186192.3-201ENST00000583427 947 ntBASIC16.8■□□□□ 0.28
RFX4Q33E94 AC073195.1-201ENST00000607241 877 ntBASIC16.8■□□□□ 0.28
RFX4Q33E94 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
RFX4Q33E94 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RFX4Q33E94 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RFX4Q33E94 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RFX4Q33E94 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RFX4Q33E94 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 AC093010.1-201ENST00000473625 1624 ntBASIC16.79■□□□□ 0.28
RFX4Q33E94 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 AC011506.1-201ENST00000474329 610 ntBASIC16.79■□□□□ 0.28
RFX4Q33E94 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
RFX4Q33E94 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.79■□□□□ 0.28
RFX4Q33E94 RARRES2P10-201ENST00000564312 460 ntBASIC16.79■□□□□ 0.28
RFX4Q33E94 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFX4Q33E94 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RFX4Q33E94 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.79■□□□□ 0.28
RFX4Q33E94 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.79■□□□□ 0.28
RFX4Q33E94 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX4Q33E94 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
RFX4Q33E94 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.78■□□□□ 0.28
RFX4Q33E94 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 B3GAT3P1-201ENST00000471720 806 ntBASIC16.78■□□□□ 0.28
RFX4Q33E94 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 RPPH1-201ENST00000516869 333 ntBASIC16.78■□□□□ 0.28
RFX4Q33E94 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RFX4Q33E94 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.78■□□□□ 0.28
RFX4Q33E94 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.78■□□□□ 0.28
RFX4Q33E94 MIR6786-201ENST00000616843 113 ntBASIC16.78■□□□□ 0.28
RFX4Q33E94 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RFX4Q33E94 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX4Q33E94 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX4Q33E94 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX4Q33E94 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX4Q33E94 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX4Q33E94 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX4Q33E94 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
RFX4Q33E94 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RFX4Q33E94 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX4Q33E94 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.77■□□□□ 0.28
RFX4Q33E94 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RFX4Q33E94 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX4Q33E94 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms