Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 YBX2P1-201ENST00000394192 760 ntBASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 AL133373.2-201ENST00000623187 2828 ntBASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 PCDHB18P-201ENST00000524813 2368 ntBASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 AC112777.1-201ENST00000540175 1423 ntBASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTC1Q2NKJ3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 KRT18P3-201ENST00000451602 1288 ntBASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 INTS4P1-201ENST00000438455 1935 ntBASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 AL357033.4-201ENST00000617703 1807 ntBASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTC1Q2NKJ3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 AC113404.2-201ENST00000507884 177 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms