Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 AC087289.5-201ENST00000586076 3175 ntBASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM1Q2M3G4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 AP002414.3-201ENST00000589352 1468 ntBASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 AC092910.1-201ENST00000482027 1129 ntBASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 AC104109.2-201ENST00000602919 1418 ntBASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SHROOM1Q2M3G4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 AC100803.2-201ENST00000562459 1963 ntBASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 AL096828.2-201ENST00000567259 1965 ntBASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 AC098831.1-202ENST00000438821 336 ntBASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 AC093909.1-201ENST00000504731 1122 ntBASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 KRT18P58-201ENST00000527480 1120 ntBASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM1Q2M3G4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 AC135776.1-201ENST00000319817 2481 ntBASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 OR7E14P-202ENST00000530490 1290 ntBASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 MTDHP4-201ENST00000600287 670 ntBASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 AC139530.3-201ENST00000620344 690 ntBASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM1Q2M3G4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 FAM220CP-201ENST00000395253 831 ntBASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.92■□□□□ 0.94
SHROOM1Q2M3G4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms