Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 AC108073.2-201ENST00000464002 357 ntBASIC17.47■□□□□ 0.39
CACNA1EQ15878 AC122714.2-201ENST00000502787 707 ntBASIC17.47■□□□□ 0.39
CACNA1EQ15878 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 AC018845.2-201ENST00000568326 409 ntBASIC17.47■□□□□ 0.39
CACNA1EQ15878 PGM5P2-202ENST00000637225 1043 ntBASIC17.47■□□□□ 0.39
CACNA1EQ15878 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 AC254562.1-201ENST00000417586 456 ntBASIC17.47■□□□□ 0.39
CACNA1EQ15878 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CACNA1EQ15878 MIR3197-201ENST00000582241 73 ntBASIC17.47■□□□□ 0.39
CACNA1EQ15878 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1EQ15878 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1EQ15878 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA1EQ15878 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CACNA1EQ15878 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CACNA1EQ15878 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.46■□□□□ 0.38
CACNA1EQ15878 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.46■□□□□ 0.38
CACNA1EQ15878 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.46■□□□□ 0.38
CACNA1EQ15878 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 BX005266.1-201ENST00000473402 457 ntBASIC17.45■□□□□ 0.38
CACNA1EQ15878 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 AC148477.5-201ENST00000625164 1645 ntBASIC17.45■□□□□ 0.38
CACNA1EQ15878 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA1EQ15878 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1EQ15878 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 AL078644.1-201ENST00000609881 752 ntBASIC17.44■□□□□ 0.38
CACNA1EQ15878 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1EQ15878 GMCL1P1-201ENST00000463439 1581 ntBASIC17.44■□□□□ 0.38
CACNA1EQ15878 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CACNA1EQ15878 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms