Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNRPFP62306 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SNRPFP62306 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.59■□□□□ 0.73
SNRPFP62306 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.59■□□□□ 0.73
SNRPFP62306 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.58■□□□□ 0.73
SNRPFP62306 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.58■□□□□ 0.73
SNRPFP62306 KRT8P47-201ENST00000604727 1398 ntBASIC19.58■□□□□ 0.73
SNRPFP62306 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPFP62306 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPFP62306 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPFP62306 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPFP62306 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPFP62306 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNRPFP62306 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SNRPFP62306 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 CHCHD2P8-201ENST00000429873 447 ntBASIC19.58■□□□□ 0.72
SNRPFP62306 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.58■□□□□ 0.72
SNRPFP62306 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.58■□□□□ 0.72
SNRPFP62306 AL445228.2-201ENST00000605589 952 ntBASIC19.58■□□□□ 0.72
SNRPFP62306 AC091076.1-201ENST00000610741 619 ntBASIC19.58■□□□□ 0.72
SNRPFP62306 IGHV3-41-201ENST00000613121 348 ntBASIC19.58■□□□□ 0.72
SNRPFP62306 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.58■□□□□ 0.72
SNRPFP62306 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.58■□□□□ 0.72
SNRPFP62306 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.58■□□□□ 0.72
SNRPFP62306 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.58■□□□□ 0.72
SNRPFP62306 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SNRPFP62306 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNRPFP62306 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SNRPFP62306 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRPFP62306 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRPFP62306 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRPFP62306 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SNRPFP62306 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 GNAS-203ENST00000306120 1878 ntBASIC19.57■□□□□ 0.72
SNRPFP62306 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SNRPFP62306 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRPFP62306 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 AC096633.1-201ENST00000422446 749 ntBASIC19.57■□□□□ 0.72
SNRPFP62306 AC246785.2-201ENST00000432512 513 ntBASIC19.57■□□□□ 0.72
SNRPFP62306 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
SNRPFP62306 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.57■□□□□ 0.72
SNRPFP62306 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.57■□□□□ 0.72
SNRPFP62306 AL592071.1-201ENST00000611956 408 ntBASIC19.57■□□□□ 0.72
SNRPFP62306 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.57■□□□□ 0.72
SNRPFP62306 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 AC100803.2-201ENST00000562459 1963 ntBASIC19.57■□□□□ 0.72
SNRPFP62306 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRPFP62306 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.57■□□□□ 0.72
SNRPFP62306 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNRPFP62306 AC016734.2-201ENST00000624325 1377 ntBASIC19.57■□□□□ 0.72
SNRPFP62306 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.56■□□□□ 0.72
SNRPFP62306 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 ARMC10P1-201ENST00000313754 855 ntBASIC19.56■□□□□ 0.72
SNRPFP62306 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.56■□□□□ 0.72
SNRPFP62306 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.56■□□□□ 0.72
SNRPFP62306 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.56■□□□□ 0.72
SNRPFP62306 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.56■□□□□ 0.72
SNRPFP62306 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SNRPFP62306 AC007613.1-201ENST00000572811 2597 ntBASIC19.56■□□□□ 0.72
SNRPFP62306 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
SNRPFP62306 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNRPFP62306 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms