Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.82■□□□□ 0.12
SEC61A1P61619 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.82■□□□□ 0.12
SEC61A1P61619 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEC61A1P61619 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.82■□□□□ 0.12
SEC61A1P61619 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SEC61A1P61619 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC61A1P61619 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.81■□□□□ 0.12
SEC61A1P61619 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SEC61A1P61619 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC61A1P61619 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SEC61A1P61619 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC61A1P61619 TSPY17P-201ENST00000450329 467 ntBASIC15.81■□□□□ 0.12
SEC61A1P61619 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.81■□□□□ 0.12
SEC61A1P61619 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.81■□□□□ 0.12
SEC61A1P61619 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SEC61A1P61619 AP003041.3-201ENST00000527151 707 ntBASIC15.81■□□□□ 0.12
SEC61A1P61619 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.81■□□□□ 0.12
SEC61A1P61619 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 AL353719.1-201ENST00000566847 864 ntBASIC15.81■□□□□ 0.12
SEC61A1P61619 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SEC61A1P61619 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
SEC61A1P61619 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SEC61A1P61619 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEC61A1P61619 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SEC61A1P61619 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC61A1P61619 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 AC104076.2-201ENST00000448912 469 ntBASIC15.8■□□□□ 0.12
SEC61A1P61619 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 CA15P1-201ENST00000481698 905 ntBASIC15.8■□□□□ 0.12
SEC61A1P61619 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.8■□□□□ 0.12
SEC61A1P61619 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
SEC61A1P61619 AL049597.2-201ENST00000565575 961 ntBASIC15.8■□□□□ 0.12
SEC61A1P61619 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
SEC61A1P61619 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 AC006011.2-201ENST00000621313 1158 ntBASIC15.8■□□□□ 0.12
SEC61A1P61619 AC010653.2-201ENST00000623505 997 ntBASIC15.8■□□□□ 0.12
SEC61A1P61619 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 AD000864.1-201ENST00000624076 2295 ntBASIC15.8■□□□□ 0.12
SEC61A1P61619 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SEC61A1P61619 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms