Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RPS2P4-201ENST00000476944 856 ntBASIC16.45■□□□□ 0.22
CXCR4P61073 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.45■□□□□ 0.22
CXCR4P61073 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CXCR4P61073 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.45■□□□□ 0.22
CXCR4P61073 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.45■□□□□ 0.22
CXCR4P61073 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 PKD1P1-201ENST00000458669 6805 ntBASIC16.45■□□□□ 0.22
CXCR4P61073 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 AC105020.1-201ENST00000435356 2205 ntBASIC16.45■□□□□ 0.22
CXCR4P61073 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
CXCR4P61073 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CXCR4P61073 AC034236.2-201ENST00000606662 1610 ntBASIC16.45■□□□□ 0.22
CXCR4P61073 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CXCR4P61073 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.44■□□□□ 0.22
CXCR4P61073 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.44■□□□□ 0.22
CXCR4P61073 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CXCR4P61073 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.44■□□□□ 0.22
CXCR4P61073 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.44■□□□□ 0.22
CXCR4P61073 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.44■□□□□ 0.22
CXCR4P61073 ESRRAP1-201ENST00000400596 1257 ntBASIC16.44■□□□□ 0.22
CXCR4P61073 AGGF1P2-201ENST00000426656 2106 ntBASIC16.44■□□□□ 0.22
CXCR4P61073 KSR1P1-201ENST00000446298 240 ntBASIC16.44■□□□□ 0.22
CXCR4P61073 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 AL353708.3-201ENST00000610272 989 ntBASIC16.44■□□□□ 0.22
CXCR4P61073 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.44■□□□□ 0.22
CXCR4P61073 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CXCR4P61073 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.44■□□□□ 0.22
CXCR4P61073 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CXCR4P61073 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CXCR4P61073 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 AC009102.3-201ENST00000623118 1491 ntBASIC16.43■□□□□ 0.22
CXCR4P61073 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.43■□□□□ 0.22
CXCR4P61073 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CXCR4P61073 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CXCR4P61073 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CXCR4P61073 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.43■□□□□ 0.22
CXCR4P61073 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 CKBP1-201ENST00000565489 1086 ntBASIC16.43■□□□□ 0.22
CXCR4P61073 RN7SL471P-201ENST00000580476 299 ntBASIC16.43■□□□□ 0.22
CXCR4P61073 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.43■□□□□ 0.22
CXCR4P61073 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.43■□□□□ 0.22
CXCR4P61073 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CXCR4P61073 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CXCR4P61073 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.43■□□□□ 0.22
CXCR4P61073 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CXCR4P61073 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CXCR4P61073 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CXCR4P61073 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CXCR4P61073 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CXCR4P61073 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms