Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNA5SP413-201ENST00000516373 109 ntBASIC15.72■□□□□ 0.11
CLDN12P56749 AC104771.1-201ENST00000603335 964 ntBASIC15.72■□□□□ 0.11
CLDN12P56749 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 AC093010.1-201ENST00000473625 1624 ntBASIC15.72■□□□□ 0.11
CLDN12P56749 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN12P56749 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 AC008894.3-201ENST00000624324 3103 ntBASIC15.71■□□□□ 0.11
CLDN12P56749 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN12P56749 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLDN12P56749 KSR1P1-201ENST00000446298 240 ntBASIC15.71■□□□□ 0.11
CLDN12P56749 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDN12P56749 AC026366.1-201ENST00000488803 879 ntBASIC15.71■□□□□ 0.11
CLDN12P56749 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN12P56749 CR392000.1-201ENST00000624770 1228 ntBASIC15.71■□□□□ 0.11
CLDN12P56749 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CLDN12P56749 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN12P56749 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDN12P56749 AC009102.3-201ENST00000623118 1491 ntBASIC15.71■□□□□ 0.1
CLDN12P56749 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CLDN12P56749 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CLDN12P56749 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN12P56749 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN12P56749 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 KRT16P1-201ENST00000399124 1418 ntBASIC15.7■□□□□ 0.1
CLDN12P56749 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN12P56749 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN12P56749 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN12P56749 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 AC011506.1-201ENST00000474329 610 ntBASIC15.7■□□□□ 0.1
CLDN12P56749 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN12P56749 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 AC110285.5-201ENST00000611501 352 ntBASIC15.7■□□□□ 0.1
CLDN12P56749 AC130371.2-201ENST00000619443 611 ntBASIC15.7■□□□□ 0.1
CLDN12P56749 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN12P56749 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN12P56749 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CLDN12P56749 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN12P56749 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN12P56749 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 UBALD1-205ENST00000590891 2641 ntBASIC15.69■□□□□ 0.1
CLDN12P56749 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN12P56749 AL163051.1-201ENST00000569214 1512 ntBASIC15.69■□□□□ 0.1
CLDN12P56749 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN12P56749 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN12P56749 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN12P56749 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN12P56749 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms