Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PCDHA12-202ENST00000613593 2588 ntBASIC16.84■□□□□ 0.29
CDH12P55289 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH12P55289 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH12P55289 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CDH12P55289 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH12P55289 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.83■□□□□ 0.28
CDH12P55289 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH12P55289 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 AL390955.1-201ENST00000428694 934 ntBASIC16.83■□□□□ 0.28
CDH12P55289 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH12P55289 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH12P55289 TSPY17P-201ENST00000450329 467 ntBASIC16.83■□□□□ 0.28
CDH12P55289 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH12P55289 AL353719.1-201ENST00000566847 864 ntBASIC16.83■□□□□ 0.28
CDH12P55289 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDH12P55289 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH12P55289 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH12P55289 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH12P55289 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
CDH12P55289 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 AL163051.1-201ENST00000569214 1512 ntBASIC16.82■□□□□ 0.28
CDH12P55289 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH12P55289 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH12P55289 MIR149-201ENST00000384879 89 ntBASIC16.82■□□□□ 0.28
CDH12P55289 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDH12P55289 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH12P55289 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH12P55289 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 FITM1-202ENST00000559294 800 ntBASIC16.82■□□□□ 0.28
CDH12P55289 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDH12P55289 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 AC141586.5-201ENST00000624546 2050 ntBASIC16.82■□□□□ 0.28
CDH12P55289 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH12P55289 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH12P55289 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH12P55289 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH12P55289 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH12P55289 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH12P55289 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.81■□□□□ 0.28
CDH12P55289 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH12P55289 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH12P55289 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH12P55289 AC099398.1-201ENST00000567919 2776 ntBASIC16.81■□□□□ 0.28
CDH12P55289 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH12P55289 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH12P55289 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDH12P55289 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH12P55289 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH12P55289 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDH12P55289 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH12P55289 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH12P55289 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH12P55289 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH12P55289 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH12P55289 AC092338.2-201ENST00000568827 1415 ntBASIC16.8■□□□□ 0.28
CDH12P55289 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH12P55289 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH12P55289 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH12P55289 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH12P55289 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH12P55289 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH12P55289 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms