Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC6A12P48065 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A12P48065 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC6A12P48065 GPR32P1-201ENST00000601788 811 ntBASIC17.4■□□□□ 0.38
SLC6A12P48065 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A12P48065 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A12P48065 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A12P48065 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 AL353692.3-201ENST00000407031 1396 ntBASIC17.4■□□□□ 0.38
SLC6A12P48065 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A12P48065 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SLC6A12P48065 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A12P48065 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A12P48065 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A12P48065 TSPY12P-201ENST00000421279 868 ntBASIC17.39■□□□□ 0.37
SLC6A12P48065 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.39■□□□□ 0.37
SLC6A12P48065 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 AL671277.2-201ENST00000458060 996 ntBASIC17.39■□□□□ 0.37
SLC6A12P48065 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC6A12P48065 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 AC005332.3-201ENST00000589904 676 ntBASIC17.39■□□□□ 0.37
SLC6A12P48065 AL390719.2-201ENST00000606993 987 ntBASIC17.39■□□□□ 0.37
SLC6A12P48065 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A12P48065 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A12P48065 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A12P48065 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A12P48065 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC6A12P48065 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A12P48065 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC6A12P48065 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A12P48065 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A12P48065 RNF126P1-202ENST00000569893 925 ntBASIC17.38■□□□□ 0.37
SLC6A12P48065 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC6A12P48065 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SLC6A12P48065 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC6A12P48065 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A12P48065 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
SLC6A12P48065 LINC01238-205ENST00000567549 1107 ntBASIC17.37■□□□□ 0.37
SLC6A12P48065 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms