Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-1P43699 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NKX2-1P43699 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NKX2-1P43699 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.79□□□□□ -0.04
NKX2-1P43699 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 AC069152.1-201ENST00000438030 544 ntBASIC14.79□□□□□ -0.04
NKX2-1P43699 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-1P43699 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.79□□□□□ -0.04
NKX2-1P43699 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 AC142086.2-201ENST00000569753 217 ntBASIC14.79□□□□□ -0.04
NKX2-1P43699 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NKX2-1P43699 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NKX2-1P43699 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NKX2-1P43699 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-1P43699 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-1P43699 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 AL355312.1-201ENST00000407115 2176 ntBASIC14.78□□□□□ -0.04
NKX2-1P43699 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.78□□□□□ -0.04
NKX2-1P43699 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 MIR564-202ENST00000385049 94 ntBASIC14.78□□□□□ -0.04
NKX2-1P43699 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.78□□□□□ -0.04
NKX2-1P43699 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.78□□□□□ -0.04
NKX2-1P43699 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.78□□□□□ -0.04
NKX2-1P43699 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 AL118508.1-201ENST00000613502 2345 ntBASIC14.78□□□□□ -0.04
NKX2-1P43699 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-1P43699 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
NKX2-1P43699 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.78□□□□□ -0.04
NKX2-1P43699 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 AC093010.1-201ENST00000473625 1624 ntBASIC14.77□□□□□ -0.04
NKX2-1P43699 AC034236.2-201ENST00000606662 1610 ntBASIC14.77□□□□□ -0.04
NKX2-1P43699 AL138688.1-201ENST00000624851 1594 ntBASIC14.77□□□□□ -0.04
NKX2-1P43699 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.77□□□□□ -0.04
NKX2-1P43699 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NKX2-1P43699 KRT8P50-201ENST00000562022 1438 ntBASIC14.77□□□□□ -0.04
NKX2-1P43699 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-1P43699 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.77□□□□□ -0.04
NKX2-1P43699 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-1P43699 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.77□□□□□ -0.05
NKX2-1P43699 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
NKX2-1P43699 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.77□□□□□ -0.05
NKX2-1P43699 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.77□□□□□ -0.05
NKX2-1P43699 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms