Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP8P40818 ECEL1P3-201ENST00000427961 737 ntBASIC19.66■□□□□ 0.74
USP8P40818 LIN28AP1-201ENST00000429574 405 ntBASIC19.66■□□□□ 0.74
USP8P40818 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP8P40818 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.66■□□□□ 0.74
USP8P40818 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.66■□□□□ 0.74
USP8P40818 AC009065.1-201ENST00000564055 1225 ntBASIC19.66■□□□□ 0.74
USP8P40818 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 AC073912.3-201ENST00000624414 853 ntBASIC19.66■□□□□ 0.74
USP8P40818 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP8P40818 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.66■□□□□ 0.74
USP8P40818 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.66■□□□□ 0.74
USP8P40818 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.65■□□□□ 0.74
USP8P40818 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
USP8P40818 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.65■□□□□ 0.74
USP8P40818 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 SLC25A3P1-201ENST00000443844 931 ntBASIC19.65■□□□□ 0.74
USP8P40818 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.65■□□□□ 0.74
USP8P40818 ATP5G1P1-201ENST00000448724 379 ntBASIC19.65■□□□□ 0.74
USP8P40818 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 SEC1P-202ENST00000473944 940 ntBASIC19.65■□□□□ 0.74
USP8P40818 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.65■□□□□ 0.74
USP8P40818 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.65■□□□□ 0.74
USP8P40818 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP8P40818 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
USP8P40818 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP8P40818 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP8P40818 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.65■□□□□ 0.74
USP8P40818 PHGDH-209ENST00000641074 1780 ntBASIC19.65■□□□□ 0.74
USP8P40818 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP8P40818 AL096828.2-201ENST00000567259 1965 ntBASIC19.64■□□□□ 0.74
USP8P40818 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP8P40818 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP8P40818 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.64■□□□□ 0.73
USP8P40818 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.64■□□□□ 0.73
USP8P40818 AC141257.4-201ENST00000634557 245 ntBASIC19.64■□□□□ 0.73
USP8P40818 AC136944.6-201ENST00000634818 245 ntBASIC19.64■□□□□ 0.73
USP8P40818 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
USP8P40818 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.64■□□□□ 0.73
USP8P40818 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP8P40818 AC141586.5-201ENST00000624546 2050 ntBASIC19.64■□□□□ 0.73
USP8P40818 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.64■□□□□ 0.73
USP8P40818 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.64■□□□□ 0.73
USP8P40818 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP8P40818 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP8P40818 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.63■□□□□ 0.73
USP8P40818 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP8P40818 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.63■□□□□ 0.73
USP8P40818 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.63■□□□□ 0.73
USP8P40818 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.63■□□□□ 0.73
USP8P40818 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
USP8P40818 AC010203.1-204ENST00000548782 407 ntBASIC19.63■□□□□ 0.73
USP8P40818 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 AC099398.1-201ENST00000567919 2776 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms