Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 WWOX-216ENST00000569818 525 ntBASIC16.77■□□□□ 0.28
TNFRSF1BP20333 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.77■□□□□ 0.28
TNFRSF1BP20333 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.77■□□□□ 0.28
TNFRSF1BP20333 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TNFRSF1BP20333 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF1BP20333 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF1BP20333 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TNFRSF1BP20333 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 SIRPAP1-201ENST00000448467 1770 ntBASIC16.77■□□□□ 0.27
TNFRSF1BP20333 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF1BP20333 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AC132938.6-201ENST00000623828 1655 ntBASIC16.76■□□□□ 0.27
TNFRSF1BP20333 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 SLC25A1P2-201ENST00000430693 912 ntBASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AC104390.1-201ENST00000555663 520 ntBASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AC112497.1-201ENST00000624824 639 ntBASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 KRT8P7-201ENST00000533003 1432 ntBASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AC092338.2-201ENST00000568827 1415 ntBASIC16.76■□□□□ 0.27
TNFRSF1BP20333 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF1BP20333 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 AC022211.2-201ENST00000585075 2527 ntBASIC16.75■□□□□ 0.27
TNFRSF1BP20333 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 UNC93B2-201ENST00000285383 730 ntBASIC16.75■□□□□ 0.27
TNFRSF1BP20333 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 TSPY17P-201ENST00000450329 467 ntBASIC16.75■□□□□ 0.27
TNFRSF1BP20333 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF1BP20333 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFRSF1BP20333 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms