Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.53■□□□□ 0.72
SYN1P17600 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.53■□□□□ 0.72
SYN1P17600 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.53■□□□□ 0.72
SYN1P17600 AJ011932.1-201ENST00000621707 465 ntBASIC19.53■□□□□ 0.72
SYN1P17600 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYN1P17600 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYN1P17600 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
SYN1P17600 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SYN1P17600 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SYN1P17600 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYN1P17600 AC141586.3-201ENST00000562166 1838 ntBASIC19.53■□□□□ 0.72
SYN1P17600 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYN1P17600 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SYN1P17600 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SYN1P17600 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SYN1P17600 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYN1P17600 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SYN1P17600 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.52■□□□□ 0.72
SYN1P17600 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYN1P17600 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SYN1P17600 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.52■□□□□ 0.72
SYN1P17600 ACTG1P14-201ENST00000446382 1122 ntBASIC19.52■□□□□ 0.72
SYN1P17600 AC008667.4-201ENST00000607370 168 ntBASIC19.52■□□□□ 0.72
SYN1P17600 AC091812.2-201ENST00000619081 385 ntBASIC19.52■□□□□ 0.72
SYN1P17600 LINC00628-201ENST00000628516 1289 ntBASIC19.52■□□□□ 0.72
SYN1P17600 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYN1P17600 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYN1P17600 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SYN1P17600 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SYN1P17600 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
SYN1P17600 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SYN1P17600 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SYN1P17600 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.52■□□□□ 0.71
SYN1P17600 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.51■□□□□ 0.71
SYN1P17600 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.51■□□□□ 0.71
SYN1P17600 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.51■□□□□ 0.71
SYN1P17600 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SYN1P17600 PMS2P4-201ENST00000412466 1052 ntBASIC19.51■□□□□ 0.71
SYN1P17600 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.51■□□□□ 0.71
SYN1P17600 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.51■□□□□ 0.71
SYN1P17600 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.51■□□□□ 0.71
SYN1P17600 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.51■□□□□ 0.71
SYN1P17600 DUX4L27-201ENST00000554796 1261 ntBASIC19.51■□□□□ 0.71
SYN1P17600 AC005225.4-201ENST00000557330 545 ntBASIC19.51■□□□□ 0.71
SYN1P17600 DUX4L17-201ENST00000557360 1267 ntBASIC19.51■□□□□ 0.71
SYN1P17600 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SYN1P17600 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.51■□□□□ 0.71
SYN1P17600 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.51■□□□□ 0.71
SYN1P17600 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SYN1P17600 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.51■□□□□ 0.71
SYN1P17600 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SYN1P17600 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 LINC01126-201ENST00000623515 1646 ntBASIC19.51■□□□□ 0.71
SYN1P17600 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SYN1P17600 SIGLEC16-201ENST00000599858 1437 ntBASIC19.51■□□□□ 0.71
SYN1P17600 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYN1P17600 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SYN1P17600 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.5■□□□□ 0.71
SYN1P17600 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.5■□□□□ 0.71
SYN1P17600 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.5■□□□□ 0.71
SYN1P17600 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.5■□□□□ 0.71
SYN1P17600 AC236430.1-201ENST00000402231 743 ntBASIC19.5■□□□□ 0.71
SYN1P17600 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.5■□□□□ 0.71
SYN1P17600 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SYN1P17600 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYN1P17600 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SYN1P17600 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.5■□□□□ 0.71
SYN1P17600 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.5■□□□□ 0.71
SYN1P17600 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.5■□□□□ 0.71
SYN1P17600 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SYN1P17600 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.5■□□□□ 0.71
SYN1P17600 AD001527.2-201ENST00000622994 785 ntBASIC19.5■□□□□ 0.71
SYN1P17600 AC105339.1-204ENST00000636249 355 ntBASIC19.5■□□□□ 0.71
SYN1P17600 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.5■□□□□ 0.71
SYN1P17600 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms