Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ITGA4P13612 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA4P13612 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA4P13612 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ITGA4P13612 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA4P13612 AC004870.1-201ENST00000315132 882 ntBASIC19.79■□□□□ 0.76
ITGA4P13612 AL845331.1-201ENST00000424978 1190 ntBASIC19.79■□□□□ 0.76
ITGA4P13612 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 AC113404.2-201ENST00000507884 177 ntBASIC19.79■□□□□ 0.76
ITGA4P13612 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGA4P13612 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 AC011840.4-201ENST00000578471 627 ntBASIC19.79■□□□□ 0.76
ITGA4P13612 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 IFNL4P1-201ENST00000607083 540 ntBASIC19.79■□□□□ 0.76
ITGA4P13612 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGA4P13612 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ITGA4P13612 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGA4P13612 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ITGA4P13612 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA4P13612 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.78■□□□□ 0.76
ITGA4P13612 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.78■□□□□ 0.76
ITGA4P13612 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.78■□□□□ 0.76
ITGA4P13612 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA4P13612 AC099336.1-202ENST00000602961 463 ntBASIC19.78■□□□□ 0.76
ITGA4P13612 AC138894.3-201ENST00000603787 634 ntBASIC19.78■□□□□ 0.76
ITGA4P13612 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ITGA4P13612 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA4P13612 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA4P13612 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.78■□□□□ 0.76
ITGA4P13612 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ITGA4P13612 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.78■□□□□ 0.76
ITGA4P13612 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ITGA4P13612 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.77■□□□□ 0.76
ITGA4P13612 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.77■□□□□ 0.76
ITGA4P13612 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.77■□□□□ 0.76
ITGA4P13612 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ITGA4P13612 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.77■□□□□ 0.76
ITGA4P13612 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.77■□□□□ 0.76
ITGA4P13612 IGHV3-47-201ENST00000425060 335 ntBASIC19.77■□□□□ 0.76
ITGA4P13612 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.77■□□□□ 0.76
ITGA4P13612 KRT18P31-201ENST00000506277 1292 ntBASIC19.77■□□□□ 0.76
ITGA4P13612 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 LINC01711-201ENST00000598340 967 ntBASIC19.77■□□□□ 0.76
ITGA4P13612 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.77■□□□□ 0.76
ITGA4P13612 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.77■□□□□ 0.76
ITGA4P13612 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.77■□□□□ 0.76
ITGA4P13612 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ITGA4P13612 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 AC067852.2-201ENST00000590513 2313 ntBASIC19.77■□□□□ 0.76
ITGA4P13612 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ITGA4P13612 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ITGA4P13612 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ITGA4P13612 AL024508.2-201ENST00000607749 1894 ntBASIC19.77■□□□□ 0.76
ITGA4P13612 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ITGA4P13612 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.76■□□□□ 0.75
ITGA4P13612 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ITGA4P13612 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ITGA4P13612 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ITGA4P13612 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.76■□□□□ 0.75
ITGA4P13612 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ITGA4P13612 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms