Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RB1P06400 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RB1P06400 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RB1P06400 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RB1P06400 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.01■□□□□ 0.63
RB1P06400 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RB1P06400 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RB1P06400 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RB1P06400 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RB1P06400 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.01■□□□□ 0.63
RB1P06400 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19■□□□□ 0.63
RB1P06400 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19■□□□□ 0.63
RB1P06400 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19■□□□□ 0.63
RB1P06400 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RB1P06400 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19■□□□□ 0.63
RB1P06400 CRYGEP-201ENST00000412192 528 ntBASIC19■□□□□ 0.63
RB1P06400 SPDYE21P-201ENST00000413323 827 ntBASIC19■□□□□ 0.63
RB1P06400 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19■□□□□ 0.63
RB1P06400 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19■□□□□ 0.63
RB1P06400 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19■□□□□ 0.63
RB1P06400 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
RB1P06400 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19■□□□□ 0.63
RB1P06400 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19■□□□□ 0.63
RB1P06400 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RB1P06400 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19■□□□□ 0.63
RB1P06400 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19■□□□□ 0.63
RB1P06400 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19■□□□□ 0.63
RB1P06400 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RB1P06400 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.99■□□□□ 0.63
RB1P06400 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.99■□□□□ 0.63
RB1P06400 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.99■□□□□ 0.63
RB1P06400 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
RB1P06400 MIR3197-201ENST00000582241 73 ntBASIC18.99■□□□□ 0.63
RB1P06400 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.99■□□□□ 0.63
RB1P06400 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RB1P06400 C20orf181-201ENST00000623918 480 ntBASIC18.99■□□□□ 0.63
RB1P06400 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RB1P06400 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.99■□□□□ 0.63
RB1P06400 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RB1P06400 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RB1P06400 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.98■□□□□ 0.63
RB1P06400 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.98■□□□□ 0.63
RB1P06400 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.98■□□□□ 0.63
RB1P06400 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.98■□□□□ 0.63
RB1P06400 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.98■□□□□ 0.63
RB1P06400 RFPL4AP1-201ENST00000530883 850 ntBASIC18.98■□□□□ 0.63
RB1P06400 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.98■□□□□ 0.63
RB1P06400 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 MIR4469-201ENST00000583919 79 ntBASIC18.98■□□□□ 0.63
RB1P06400 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RB1P06400 AC004706.3-202ENST00000621574 984 ntBASIC18.98■□□□□ 0.63
RB1P06400 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RB1P06400 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RB1P06400 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms