Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB2P05538 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 SLC25A6P5-201ENST00000435663 894 ntBASIC18.29■□□□□ 0.52
HLA-DQB2P05538 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 AC010331.1-201ENST00000611423 582 ntBASIC18.29■□□□□ 0.52
HLA-DQB2P05538 AC009154.2-201ENST00000621177 724 ntBASIC18.29■□□□□ 0.52
HLA-DQB2P05538 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB2P05538 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AL445228.2-201ENST00000605589 952 ntBASIC18.28■□□□□ 0.52
HLA-DQB2P05538 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB2P05538 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 AC022898.2-201ENST00000616822 1312 ntBASIC18.27■□□□□ 0.52
HLA-DQB2P05538 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 MIR1224-201ENST00000408193 85 ntBASIC18.27■□□□□ 0.52
HLA-DQB2P05538 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 TSPY22P-201ENST00000427496 604 ntBASIC18.27■□□□□ 0.52
HLA-DQB2P05538 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DQB2P05538 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms