Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGN1P05114 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGN1P05114 MST1L-201ENST00000442552 2185 ntBASIC16.36■□□□□ 0.21
HMGN1P05114 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HMGN1P05114 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGN1P05114 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HMGN1P05114 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HMGN1P05114 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 AC141586.5-201ENST00000624546 2050 ntBASIC16.35■□□□□ 0.21
HMGN1P05114 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HMGN1P05114 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGN1P05114 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 WWOX-216ENST00000569818 525 ntBASIC16.35■□□□□ 0.21
HMGN1P05114 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HMGN1P05114 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HMGN1P05114 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGN1P05114 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGN1P05114 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGN1P05114 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 AL359736.2-201ENST00000621992 437 ntBASIC16.34■□□□□ 0.21
HMGN1P05114 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HMGN1P05114 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGN1P05114 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGN1P05114 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.33■□□□□ 0.21
HMGN1P05114 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGN1P05114 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMGN1P05114 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGN1P05114 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HMGN1P05114 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGN1P05114 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMGN1P05114 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HMGN1P05114 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 TSPY17P-201ENST00000450329 467 ntBASIC16.33■□□□□ 0.2
HMGN1P05114 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 AC104390.1-201ENST00000555663 520 ntBASIC16.33■□□□□ 0.2
HMGN1P05114 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.33■□□□□ 0.2
HMGN1P05114 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.33■□□□□ 0.2
HMGN1P05114 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 AP001412.1-201ENST00000608405 714 ntBASIC16.33■□□□□ 0.2
HMGN1P05114 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms