Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFBP01127 ACTG1P14-201ENST00000446382 1122 ntBASIC18.03■□□□□ 0.48
PDGFBP01127 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.03■□□□□ 0.48
PDGFBP01127 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFBP01127 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.03■□□□□ 0.48
PDGFBP01127 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.03■□□□□ 0.48
PDGFBP01127 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.03■□□□□ 0.48
PDGFBP01127 AC105339.1-204ENST00000636249 355 ntBASIC18.03■□□□□ 0.48
PDGFBP01127 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 AC010460.3-201ENST00000511359 1579 ntBASIC18.03■□□□□ 0.48
PDGFBP01127 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDGFBP01127 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 KRT8P47-201ENST00000604727 1398 ntBASIC18.03■□□□□ 0.48
PDGFBP01127 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PDGFBP01127 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDGFBP01127 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFBP01127 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PDGFBP01127 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.02■□□□□ 0.48
PDGFBP01127 MYLKP1-201ENST00000509077 1580 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 AC093214.1-201ENST00000511688 1107 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFBP01127 DUX4L27-201ENST00000554796 1261 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDGFBP01127 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PDGFBP01127 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFBP01127 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 AC025580.3-201ENST00000617932 1424 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 AJ011932.1-201ENST00000621707 465 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 AC073592.5-201ENST00000624854 528 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 LINC00628-201ENST00000628516 1289 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 AC092902.6-201ENST00000641783 218 ntBASIC18.02■□□□□ 0.48
PDGFBP01127 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFBP01127 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFBP01127 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PDGFBP01127 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFBP01127 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFBP01127 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFBP01127 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFBP01127 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFBP01127 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFBP01127 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 AC074386.1-202ENST00000463561 864 ntBASIC18.01■□□□□ 0.47
PDGFBP01127 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFBP01127 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDGFBP01127 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFBP01127 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18■□□□□ 0.47
PDGFBP01127 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18■□□□□ 0.47
PDGFBP01127 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDGFBP01127 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDGFBP01127 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18■□□□□ 0.47
PDGFBP01127 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18■□□□□ 0.47
PDGFBP01127 FAM86GP-201ENST00000448322 971 ntBASIC18■□□□□ 0.47
PDGFBP01127 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18■□□□□ 0.47
PDGFBP01127 AC005225.4-201ENST00000557330 545 ntBASIC18■□□□□ 0.47
PDGFBP01127 AC096734.2-201ENST00000562054 433 ntBASIC18■□□□□ 0.47
PDGFBP01127 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PDGFBP01127 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18■□□□□ 0.47
PDGFBP01127 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18■□□□□ 0.47
PDGFBP01127 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18■□□□□ 0.47
PDGFBP01127 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFBP01127 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.99■□□□□ 0.47
PDGFBP01127 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.99■□□□□ 0.47
PDGFBP01127 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms