Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.2■□□□□ 0.82
GGPS1O95749 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 AL022342.1-201ENST00000400363 863 ntBASIC20.2■□□□□ 0.82
GGPS1O95749 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
GGPS1O95749 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.2■□□□□ 0.82
GGPS1O95749 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.2■□□□□ 0.82
GGPS1O95749 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.2■□□□□ 0.82
GGPS1O95749 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GGPS1O95749 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.19■□□□□ 0.82
GGPS1O95749 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.19■□□□□ 0.82
GGPS1O95749 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.19■□□□□ 0.82
GGPS1O95749 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.19■□□□□ 0.82
GGPS1O95749 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
GGPS1O95749 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.19■□□□□ 0.82
GGPS1O95749 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.19■□□□□ 0.82
GGPS1O95749 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.19■□□□□ 0.82
GGPS1O95749 AC064862.7-201ENST00000604520 867 ntBASIC20.19■□□□□ 0.82
GGPS1O95749 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 AP001269.4-201ENST00000609611 512 ntBASIC20.19■□□□□ 0.82
GGPS1O95749 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.19■□□□□ 0.82
GGPS1O95749 AL355877.3-201ENST00000622820 899 ntBASIC20.19■□□□□ 0.82
GGPS1O95749 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.19■□□□□ 0.82
GGPS1O95749 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.19■□□□□ 0.82
GGPS1O95749 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
GGPS1O95749 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GGPS1O95749 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.18■□□□□ 0.82
GGPS1O95749 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GGPS1O95749 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.18■□□□□ 0.82
GGPS1O95749 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
GGPS1O95749 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.18■□□□□ 0.82
GGPS1O95749 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 KRT18P67-201ENST00000432816 1264 ntBASIC20.18■□□□□ 0.82
GGPS1O95749 RNA5SP419-201ENST00000515908 135 ntBASIC20.18■□□□□ 0.82
GGPS1O95749 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.18■□□□□ 0.82
GGPS1O95749 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.18■□□□□ 0.82
GGPS1O95749 AL773604.1-201ENST00000617417 272 ntBASIC20.18■□□□□ 0.82
GGPS1O95749 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
GGPS1O95749 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 NEFHP1-201ENST00000412845 2629 ntBASIC20.18■□□□□ 0.82
GGPS1O95749 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GGPS1O95749 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GGPS1O95749 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 AC073592.3-201ENST00000625118 1834 ntBASIC20.18■□□□□ 0.82
GGPS1O95749 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GGPS1O95749 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GGPS1O95749 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GGPS1O95749 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.17■□□□□ 0.82
GGPS1O95749 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.17■□□□□ 0.82
GGPS1O95749 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
GGPS1O95749 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GGPS1O95749 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
GGPS1O95749 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.17■□□□□ 0.82
GGPS1O95749 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GGPS1O95749 FGFR3P6-201ENST00000457012 610 ntBASIC20.17■□□□□ 0.82
GGPS1O95749 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.17■□□□□ 0.82
GGPS1O95749 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.17■□□□□ 0.82
GGPS1O95749 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.17■□□□□ 0.82
GGPS1O95749 AP001005.1-201ENST00000571755 1248 ntBASIC20.17■□□□□ 0.82
GGPS1O95749 MTDHP3-201ENST00000594186 672 ntBASIC20.17■□□□□ 0.82
GGPS1O95749 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
GGPS1O95749 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.17■□□□□ 0.82
GGPS1O95749 AC148477.8-201ENST00000624298 468 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms