Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LTN1O94822 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LTN1O94822 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.75■■□□□ 1.39
LTN1O94822 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.75■■□□□ 1.39
LTN1O94822 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LTN1O94822 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LTN1O94822 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.75■■□□□ 1.39
LTN1O94822 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.75■■□□□ 1.39
LTN1O94822 AP006288.1-201ENST00000446065 395 ntBASIC23.75■■□□□ 1.39
LTN1O94822 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LTN1O94822 AC134684.3-201ENST00000641758 218 ntBASIC23.75■■□□□ 1.39
LTN1O94822 AC132938.5-201ENST00000624980 1813 ntBASIC23.75■■□□□ 1.39
LTN1O94822 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.75■■□□□ 1.39
LTN1O94822 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LTN1O94822 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LTN1O94822 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.74■■□□□ 1.39
LTN1O94822 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.74■■□□□ 1.39
LTN1O94822 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.74■■□□□ 1.39
LTN1O94822 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.74■■□□□ 1.39
LTN1O94822 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.74■■□□□ 1.39
LTN1O94822 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.74■■□□□ 1.39
LTN1O94822 AC103564.2-201ENST00000432853 1299 ntBASIC23.74■■□□□ 1.39
LTN1O94822 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC23.74■■□□□ 1.39
LTN1O94822 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.74■■□□□ 1.39
LTN1O94822 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.74■■□□□ 1.39
LTN1O94822 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.74■■□□□ 1.39
LTN1O94822 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LTN1O94822 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
LTN1O94822 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 AC100803.2-201ENST00000562459 1963 ntBASIC23.73■■□□□ 1.39
LTN1O94822 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 KRT18P2-201ENST00000447938 1258 ntBASIC23.73■■□□□ 1.39
LTN1O94822 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.73■■□□□ 1.39
LTN1O94822 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.73■■□□□ 1.39
LTN1O94822 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.73■■□□□ 1.39
LTN1O94822 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LTN1O94822 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.73■■□□□ 1.39
LTN1O94822 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
LTN1O94822 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.72■■□□□ 1.39
LTN1O94822 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LTN1O94822 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
LTN1O94822 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LTN1O94822 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LTN1O94822 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LTN1O94822 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LTN1O94822 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.72■■□□□ 1.39
LTN1O94822 PRYP5-201ENST00000451909 266 ntBASIC23.72■■□□□ 1.39
LTN1O94822 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.72■■□□□ 1.39
LTN1O94822 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.72■■□□□ 1.39
LTN1O94822 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.72■■□□□ 1.39
LTN1O94822 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.72■■□□□ 1.39
LTN1O94822 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.71■■□□□ 1.39
LTN1O94822 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.71■■□□□ 1.39
LTN1O94822 AC112482.1-201ENST00000492080 688 ntBASIC23.71■■□□□ 1.39
LTN1O94822 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
LTN1O94822 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.71■■□□□ 1.39
LTN1O94822 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.71■■□□□ 1.39
LTN1O94822 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.71■■□□□ 1.39
LTN1O94822 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.71■■□□□ 1.39
LTN1O94822 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.71■■□□□ 1.39
LTN1O94822 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 AL096828.2-201ENST00000567259 1965 ntBASIC23.71■■□□□ 1.39
LTN1O94822 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.71■■□□□ 1.39
LTN1O94822 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.71■■□□□ 1.39
LTN1O94822 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LTN1O94822 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
LTN1O94822 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
LTN1O94822 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms